Basic Statistics
Measure | Value |
---|---|
Filename | ddSeq7_S2_R2_combined.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 49832257 |
Sequences flagged as poor quality | 0 |
Sequence length | 75 |
%GC | 39 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | 1472396 | 2.9547046203426026 | No Hit |
GATGTACTCTGCGTTGATACCACTGCTTCCGCGGACAGGCGTGTAGATCTCGGTGGTCGCCGTATCATTAAAAAA | 65338 | 0.13111587540576378 | Illumina RNA PCR Primer (100% over 30bp) |
GTACTCTGCGTTGATACCACTGCTTCCGCGGACAGGCGTGTAGATCTCGGTGGTCGCCGTATCATTAAAAAAAAG | 64634 | 0.12970313586237928 | Illumina RNA PCR Primer (100% over 30bp) |
GGCGTGTAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | 56250 | 0.11287869220934545 | No Hit |